DIAsource ImmunoAssays has received China FDA clearance for its 25OH Vitamin D ELISA assay based on proprietary (Patented) monoclonal antibodies. The test is successfully launched in the Chinese market in collaboration with a local Chinese distributor and its sub-distributors. The assay which has the CE mark and is FDA cleared, is characterized by a very simple protocol with an extremely efficient pretreatment solution directly in the ELISA well. Its extreme user-friendliness makes it a popular assay among manual ELISA users as well as in laboratories that need high throughput using open ELISA instruments. The company provides validated protocols for the most common ELISA automates in the market. This assay is one of the various assays for determination of Vitamin D (25OH Vitamin D, 1,25 (OH)2 Vitamin D and free 25OH Vitamin D) that DIAsource has available (IVD and RUO versions) in its product portfolio either in an ELISA and/or RIA format.

Rheonix Inc., a developer of fully automated molecular diagnostics solutions, has been granted patent 9,132,398, “Integrated Microfluidic Device and Methods,” for the Rheonix CARD^® cartridge, which enables assays to be performed on the company’s EncompassMDx^® and Encompass Optimum™ instruments. The CARD, which stands for Chemistry and Reagent Device, will make molecular diagnostics simpler and easier to perform through an innovative and functional design that delivers a fully automated molecular assay at a fraction of the cost of other options. All assay steps are performed within the fully enclosed cartridge, thus eliminating the potential for contamination, reducing user error, and streamlining workflow.
The CARD’s design enables adoption of advanced molecular technology by laboratories of all types, from small community hospital labs to highly complex, centralized laboratories. The design also facilitates implementation across a wide range of market opportunities, including next-generation sequencing (NGS) sample prep, research-use-only testing, food and beverage industry applications, and in vitro diagnostics.  
The ’398 patent allows researchers and clinicians to quickly, easily, and cost-effectively run several samples through a fully integrated and automated nucleic acid amplification test, from raw sample input through detection, with no user intervention. Each CARD allows for simultaneous testing of four different samples and can handle a broad range of sample types, such as fresh tissue, urine, whole blood, serum, saliva, swabs, and formalin-fixed, paraffin-embedded (FFPE) tissue. The Rheonix CARD performs multiple molecular techniques, including sample preparation, such as chemical and enzymatic lysis and DNA purification; amplification, such as endpoint polymerase chain reaction (PCR), reverse transcriptase PCR, and quantitative PCR; and detection on a low-density microarray or lateral flow strip.
“The ’398 patent recognizes the groundbreaking achievement we have reached with the Rheonix CARD. From the device’s hardware to its process, it will help make molecular diagnostics a reality in laboratories worldwide,” said Tony Eisenhut, president of Rheonix. “With the lowest cost of ownership of any molecular platform, the patent confirms the novelty of the Rheonix approach to molecular diagnostics. Where other systems have traditionally emphasized either multiplex or throughput, Rheonix has designed single-use cartridges that do both and can perform sophisticated functions with a simple design. This lowers laboratory costs by eliminating waste in time, equipment and consumables, and reduces the amount of highly skilled labour. Rheonix is helping bring powerful molecular tools to laboratories that could not previously afford to purchase or run them.”
The dual-layer design of the Rheonix CARD automatically manipulates reagents internally with its active fluidic network of pumps, valves and channels. The upper surface of the CARD contains reservoirs that hold reagents used in the extraction, purification, amplification and detection process and any resulting liquid waste. The channels and pumps located on the lower surface of the CARD are used to transport and mix reagents and move wastes into the reservoirs on the top. By actively pumping fluids from reservoir to reservoir within the CARD, molecular diagnostic tests can be performed automatically.

Cancer is a result of normal cellular functions going wildly awry on a genetic level. That fact has been known for some time, but increasing evidence is showing that the human microbiome, the diverse population of microorganisms within every person, may play a key role in either setting the stage for cancer or even directly causing some forms of it. A new study from the Perelman School of Medicine at the University of Pennsylvania, led by Erle S. Robertson, PhD and James C. Alwine, PhD, has identified, for the first time, an association between two microbial signatures and triple negative breast cancer (TNBC), the most aggressive form of the disease.

‘Viruses and other microorganisms probably have much more to do with cancer, at least the propagation of cancer and promotion of it, than is really known,’ said Alwine, a professor of Cancer Biology and associate director for core services at the Abramson Cancer Center. Using a microarray technology called PathoChip containing 60,000 molecular probes to identify all known viruses and pathogenic bacteria, fungi, parasites, and other microorganisms, Robertson, a professor of Microbiology and his colleagues screened tissue samples from 100 TNBC patients.

They also examined 40 matched and non-matched controls (matched controls are non-tumour tissue from TNBC patients; non-matched controls are breast tissue from healthy patients).

The team found a distinct microbial signature distinguishing TNBC tissue from normal samples, which could be further delineated into two broad clusters, one predominantly viral and the other predominantly bacterial, with some fungi and parasites.

‘If we look at this closely, we may also find some smaller clusters within those major groups that could give us some insights to unique identifiers for individuals in these clusters,’ stated Robertson, who is also associate director for global cancer research and co-leader of the tumour virology program at the Abramson Cancer Center. He explains that the team found ‘about 30 organisms that provide a specific type of signature to give us clues for developing a diagnostic tool.’ Co-authors Sagarika Banerjee, PhD, and Kristen Peck, from the Robertson lab, screened the organisms, and Michael Feldman, MD, PhD, and Natalie Shi from the department of Pathology and Laboratory Medicine, performed the pathology examinations to identify the TNBC cases.

Among the most prevalent viruses detected were Herpesviruses, Parapoxviruses, Retroviruses, Hepadnaviruses, Polyomaviruses, and Papillomaviruses. Significant bacterial signatures included Arcanobacterium, Brevundimonas, Sphingobacteria, and Geobacillus, while fungal species Pleistophora and Piedra and parasitic organisms Foncecaea and Trichuris were among the prominent ones identified. 

Alwine emphasizes that the detection of these and the other pathogens in TNBC tissues does not necessarily mean that they actually cause cancer. ‘There are a lot of different ways to look at this,’ he pointed out. ‘It’s possible that some of the organisms we’re looking at have a causative effect, but we don’t know that. We can’t say until it’s been thoroughly tested by many more experiments.’ One possibility is that the organisms could be adding something to the cellular microenvironment that helps damaged cells to become malignant or pushes them over the edge into cancer. Alternatively, certain organisms may simply find tumor tissue a favorable environment, without having any direct involvement at all with the cancer. ‘They might just be there because it’s a good place to hang out,’ Alwine said.

In either case, finding a distinct microbial signature associated with cancer raises the prospect of new diagnostic possibilities. ‘We’re looking at the signature as a potential for being able to diagnose cancer, possibly at an earlier stage,’ Alwine explained. Penn Medicine

Testicular cancer used to be a brutal killer. If you were diagnosed with non-seminoma (a type of testicular germ cell tumour) which had spread to the abdominal lymph nodes – surgical removal of these nodes was the only thing that could possibly cure you. If you had more advanced late-stage testicular cancer, little could be done.

In the 1970s, The Institute of Cancer Research, London, drove the development of the platinum-based chemotherapy cisplatin which, when used in combination with other chemotherapy drugs, was highly effective. The 1980s saw the arrival of carboplatin – also developed at the ICR – providing a much less toxic alternative to cisplatin.

Death rates from testicular cancer – even in cases where the cancer has spread to other parts of the body – came tumbling down, falling by around 80%. Since the early 1970s survival for testicular cancer has risen continuously, and current cure rates are a remarkable 96%.

With the survival rates being so high, research attention now needs to be focused on the minority of cases where patients do not survive. These are men who have disease that is inherently resistant to platinum. Finding out what is genetically different in the tumours of men who do not respond to chemotherapy will be another critical clue.

Dr Clare Turnbull, a senior researcher in the Division of Genetics and Epidemiology, and an honorary consultant at The Royal Marsden NHS Foundation Trust, is at the forefront of pinpointing the inherited genetic variants which increase a man’s risk of developing testicular cancer, and those mutations in the tumour that convey treatment resistance.

In January, Dr Turnbull and her team uncovered new genetic mutations in testicular germ cell tumours, which make up the vast majority of testicular cancers. They found new chromosome duplications and other abnormalities that could contribute to the development of this cancer, as well as confirming a previous association with a gene called KIT. Their study also found defective copies of a DNA repair gene called XRCC2 in a patient who had become resistant to platinum-based chemotherapy. They were able to support the link between XRCC2 and platinum resistance by sequencing an additional platinum-resistant tumour.

“Although generally testicular cancer responds well to treatment, resistance to platinum-based chemotherapy is associated with a poor long-term survival rate,” explains Dr Turnbull. “The repercussions of these findings could be significant for men suffering with this disease. In the future, men who are destined to fail platinum treatment – currently around 3% of cases – could be identified before they endure courses of chemotherapy and be offered different treatments, more suited to their particular type of tumour.”

Scientists are also looking for clues in the genes of men who have developed testicular cancer so these can be used to identify men who are at high risk of the disease before they develop the cancer. Dr Turnbull’s research in this area over the last 10 years has been highly successful. With the recent discovery of ten new genetic loci associated with testicular cancer development, the total number of loci for testicular cancer identified is now 19 – and all of these have been found in studies led by or involving Dr Turnbull.

“Discovering genetic factors involved in testicular cancer potentially allows us to identify those at high risk before they develop cancer,” explains Dr Turnbull. “These men might benefit from screening, so we can catch the disease very early or even put in place preventative measures to stop them developing it at all.” Institute of Cancer Research

A suspected case of sexual transmission of Ebola virus disease (EVD) in Liberia was confirmed using genomic analysis, thanks to in-country laboratory capabilities established by U.S. Army scientists in collaboration with the Liberian Institute for Biomedical Research (LIBR).
The work provides molecular evidence of Ebola virus (EBOV) transmission between an EVD survivor and his female partner. It also demonstrates the value of real-time genomic surveillance during an outbreak, according to senior author Gustavo Palacios, Ph.D., of the U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID).

CPT Suzanne Mate, Ph.D., of USAMRIID, said scientists working at the LIBR earlier this year analysed blood samples from a female patient who tested positive for EBOV in March 2015 when there had been no new documented cases for 30 days. The patient was reported have had recent sexual intercourse with a male partner who had survived EVD and had been declared EBOV negative in early October 2014.

Following the patient’s death on March 27, Mate said, public health officials were able to secure the consent of the male survivor to obtain and test a semen sample from him. The semen sample tested EBOV positive by quantitative RT-PCR, but the assay indicated that the level of viral RNA was low and required a different sample preparation method than the one originally deployed to sequence EBOV RNA from acute samples.

“We implemented a new enrichment strategy in collaboration with scientists from Illumina, Inc. that was pivotal in obtaining the required coverage to complete downstream genomic analysis,” said Michael Wiley, Ph.D, of USAMRIID. Next-generation sequencing of the enriched EBOV RNA extracted from the male survivor’s semen was used to compare the genome for similarity to the virus RNA extracted from the female patient’s blood sample.

“Ebola virus genomes assembled from the patient’s blood and the survivor’s semen were consistent with direct transmission,” commented Jason Ladner, Ph.D., of USAMRIID. “The samples shared three genetic substitutions that have not been found in any other Ebola virus sequences in Western Africa.”

In addition, said Ladner, these three genetic changes were distinct from the last
documented transmission chain in Liberia prior to this case. Combined with epidemiologic data, the genomic analysis provides support for sexual transmission of Ebola virus and for the persistence of infective EBOV in semen for more than 179 days after disease onset. This caused both the Centers for Disease Control and Prevention and the World Health Organization to change their recommendations for convalescent patients regarding sexual contact until more definitive information is obtained about how long Ebola virus can persist in semen. Research Institute of Infectious Diseases