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Archive for category: E-News

E-News

Study refutes research claims that call into question use of vessel-targeting, anticancer drugs

, 26 August 2020/in E-News /by 3wmedia

Charles Eberhart, M.D., Ph.D. Johns Hopkins scientists have published laboratory data refuting studies that suggest blood vessels that form within brain cancers are largely made up of cancer cells. The theory of cancer-based blood vessels calls into question the use and value of anticancer drugs that target these blood vessels, including bevacizumab (Avastin).
‘We don’t question whether brain cancer cells have the potential to express blood vessel markers and may occasionally find their way into blood vessels, but we do question the extent to which this happens,’ says Charles Eberhart, M.D., Ph.D., chief of neuropathology at the Johns Hopkins University School of Medicine. ‘In general, we find no evidence in our study that these vessels contain substantial amounts of cancer cells.’
Eberhart, professor of pathology, ophthalmology and oncology at Johns Hopkins, said he first encountered claims about the cancerous nature of tumour blood vessels about a year ago when he was invited to join students at a journal club meeting, a forum for discussing studies published in medical journals. ‘My first reaction to this research was ‘How could this be true?’’ says Eberhart. ‘Our clinical experience examining tissue from brain cancers does not support it.’
Studies have long demonstrated that malignant brain tumours contain large numbers of blood vessels to feed their growing demand for nutrients. The blood vessels are formed when tumours pump out growth factors that increase vessel production. Such studies opened the door to treatment strategies that specifically targeted blood-vessel growth and the vessel cells themselves.
More recently, scientists in Italy and the Memorial Sloan Kettering Cancer Center in New York published results of studies suggesting that these tumour blood vessels are made by primitive types of brain cancer cells that are a form of stem cells. In their studies, they found tumour markers on blood vessel cells in 20 to 90 percent of their brain cancer samples. The U.S./Italian research teams said their findings also suggested that the cancer-like blood vessels were more prone to drug resistance, potentially explaining why drugs like bevacizumab yield tumour-shrinking responses, but only for short periods. Bevacizumab is currently approved by the U.S. Food and Drug Administration for use in patients with colorectal, lung, kidney and brain cancers.
Eberhart said pathologists, including those who work on brain tissue, use certain tissue-based techniques to distinguish cancer cells from normal ones. When evaluating specimens of brain tissue removed during surgery for suspected cancer, he said, most pathologists agree that blood vessel cells in these specimens consistently lack the molecular changes associated with cancer cells, according to Eberhart. In fact, they often use these blood vessel cells as ‘normal controls’ to compare with potentially cancerous ones.
After the journal club experience, Eberhart teamed up with fellow neuropathologist Fausto Rodriguez, M.D., and colleagues at the Dana Farber Cancer Institute and Harvard Medical School in Boston to look more closely at the molecular features of blood vessel cells in brain cancer samples. They tested more than 100 samples from patients at Johns Hopkins and Dana Farber for EGFR and IDH1 markers, two common genes altered in brain cancer.
‘We also used a marker called CD34 to differentiate vascular [blood vessel] cells from other types of cells,’ says Rodriguez, assistant professor of pathology at Johns Hopkins. The research teams found no more than 10 percent of their samples contained vascular cells with EGFR or IDH1 cancer markers, and in those rare tumour samples, only a few cells exhibited those markers. The Johns Hopkins-Dana Farber-Harvard team tested all parts of the vessel walls for presence of the cancer markers.
Although the two groups used different markers to identify vessel cells, Rodriguez says ‘there is no marker that is absolute for each cell.’ Johns Hopkins Medical Institutions

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New gene expression test predicts benign disease in cytologically indeterminate thyroid nodules

, 26 August 2020/in E-News /by 3wmedia

Each year, tens of thousands of patients have all or part of their thyroids removed to rule out cancer because of suspicious, but uncertain, cytology test results. In the majority of cases, the suspicious thyroid nodules are determined to be ultimately benign.
Now, new research led by Brigham and Women’s Hospital (BWH) finds that a novel, genomic diagnostic test that measures the expression of 167 genes has shown promise in improving pre-operative risk assessment by re-classifying otherwise indeterminate results from thyroid biopsies as either benign or suspicious.
‘Our findings show that the gene expression test can substantially reclassify otherwise inconclusive results from thyroid biopsies, said Erik Alexander, MD, lead author of the paper and a physician-researcher in the Division of Endocrinology, Diabetes and Hypertension at Brigham and Women’s Hospital. ‘Currently, indeterminate thyroid nodules are usually referred for thyroid surgery given the unanswered question of thyroid cancer. While all care should be personalised, our findings suggest that this test has the potential to drastically reduce unnecessary surgery and allow physicians to monitor many patients in a more conservative fashion.’
Thyroid nodules are common and ultrasound-guided needle biopsies (fine needle aspiration) have been shown to accurately identify about 65-75 percent of nodules as benign. Approximately five-10 percent of diagnostic biopsies are malignant. The remaining biopsies produce indeterminate results – occurring about fifteen to thirty percent of the time. For these patients, there remains substantial concern for thyroid cancer, though the diagnosis is uncertain. Because of the concern for cancer, in most cases, all or part of the thyroid is removed for final diagnosis. However, the nodule is ultimately benign in seventy to eighty percent of cases. For these patients, surgery was not needed and the patient was unnecessarily exposed to the cost, risk and morbidity associated with this intervention.
In this research study, researchers enrolled 3,789 patients and collected 4,812 thyroid samples from nodules larger than 1 cm and evaluated the effectiveness of a novel gene expression test in 265 thyroid samples that were cytologically indeterminate (suspicious for cancer, though not conclusive) from 49 different academic and community hospital sites around the United States. Samples were simultaneously collected for the standard-of-care cytology analysis, as well as one or two additional needle sticks for inclusion in the study. If the cytology result was indeterminate, the study sample was then analysed using the gene expression test. Thyroid surgery was performed based on the judgement of the treating physician who was blinded to the test results. At completion of the study, the gene expression test results were compared to final histopathology diagnosis (the gold-standard diagnosis) provided by two blinded pathology experts following their review of the surgical tissue sample.
For all cytologically indeterminate nodules, the researchers found that when the gene expression test was benign, histopathological analysis of the nodule proved it benign 93 percent of the time. And when applied to lower risk subgroups of indeterminate thyroid samples labelled ‘atypia (or follicular lesion) of an undetermined significance’ or ‘follicular neoplasm,’ the accuracy improved to 94 and 95 percent, respectively.
‘This very high negative predictive value is comparable to that of a cytologically benign cytology result. Therefore, such a result will allow clinicians to recommend a more conservative approach of watching waiting in lieu of diagnostic surgery,’ said Alexander. ‘It is estimated that over 50 percent of current thyroid surgeries are performed unnecessarily (for cytologically indeterminate, though histopathologically benign nodules), and therefore could be impacted by the gene expression test.’ Brigham and Women’s Hospital

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Pancreatic cancer may be detected with simple intestinal probe

, 26 August 2020/in E-News /by 3wmedia

By simply shining a tiny light within the small intestine, close to that organ’s junction with the pancreas, physicians at Mayo Clinic’s campus in Florida have been able to detect pancreatic cancer 100 percent of the time in a small study. The light, attached to a probe, measures changes in cells and blood vessels in the small intestine produced by a growing cancer in the adjoining pancreas.
This minimally invasive technique, called Polarisation Gating Spectroscopy, will now be tested in a much larger international clinical trial led by the Mayo Clinic researchers. The preliminary study suggests it may be possible, one day, to use a less invasive endoscope to screen patients for early development of pancreatic cancer.
The pancreas is notoriously hard to reach and see due to its very deep location in the abdomen, surrounded by intestines. The study investigators theorised that there may be changes in the nearby ‘normal appearing’ tissue of the small intestine which is much more accessible.
‘No one ever thought you could detect pancreatic cancer in an area that is somewhat remote from the pancreas, but this study suggests it may be possible,’ says Dr. Wallace, the chairman of the Division of Gastroenterology at Mayo Clinic in Florida. ‘Although results are still preliminary, the concept of detection field effects of nearby cancers holds great promise for possible early detection of pancreatic cancer.’
Pancreatic cancer is one of the most deadly of human tumours. It is only curable in 5 percent of cases, and even when it is surgically removed, 70 percent of patients have a recurrence that is fatal, Dr. Wallace says. There are no ways currently to detect the cancer early enough to cure a substantial number of patients, he says.
Pancreatic cancer is now usually detected through an imaging scan, followed by an invasive biopsy. Tumours found in this way are usually at an advanced stage.
In this study, the Mayo Clinic physicians tested a light probe developed by their long-time collaborators at Northwestern University.
The light, attached to a small fibre-optic probe known as an endoscope, measures the amount of oxygenated blood as well as the size of blood vessels in tissue near the duct where the pancreas joins the small intestine. Because a growing tumour requires a heightened supply of blood, normal tissue in the vicinity of the cancer Mayo Clinic Arizona

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DNA repair pathway score for predicting chemotherapy response in ovarian cancer patients

, 26 August 2020/in E-News /by 3wmedia

A DNA repair pathway-focused score has the potential to help determine if first-line platinum based chemotherapy can benefit advanced-stage ovarian cancer patients, according to a study.
Most ovarian cancer patients are diagnosed with advanced disease (stages III and IV). They undergo surgery to remove as much tumour as possible, and then undergo platinum-based chemotherapy. But tools to predict response to platinum-based chemotherapy in ovarian cancer patients have been inadequate.
In order to determine if a DNA repair pathway-focused score could help predict outcomes for ovarian cancer patients treated with platinum-based chemotherapy, Josephine Kang, M.D., Ph.D., of the Department of Radiation Oncology at Dana Farber Cancer Institute, and colleagues gathered gene expression data from The Cancer Genome Atlas (TCGA) database for patients with advanced stage ovarian cancer, and established a molecular score by looking at the genes involved in platinum-induced DNA damage repair pathways. The patients were placed either into low or high score categories, and the prognostic value of the score for overall survival, recurrence free survival, and progression-free survival was assessed.
The researchers found that patients with high scores showed a statistically significant improved overall survival compared to the patients with low scores. These patients’ score was positively correlated with complete response rate, recurrence-free survival, and progression-free survival. The researchers also found that the patients’ scores outperformed other known clinical factors in predicting overall survival in the TCGA dataset as well as in two additional validation sets. ‘Developing the ability to predict OS and outcomes to chemotherapy using prognostic markers such as the score is critical, particular in ovarian cancer, because there are presently no other good clinical measures to predict response to standard platinum-based chemotherapy,’ the authors write.
They also note the study’s limitations, namely that the score has not yet been tested prospectively in a clinical trial, although they do believe it is ready for testing. ‘With additional prospective validation in clinical trials, we hope that the score can become a powerful tool that is useful in stratifying advanced-stage ovarian cancer patients toward optimal treatments incorporating new treatment regimens vs. current standard of care,’ the authors write. EurekAlert

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Beckman Coulter obtains CLIA certificate, licensure for clinical sequencing

, 26 August 2020/in E-News /by 3wmedia

Beckman Coulter, Inc. has obtained a CLIA Certificate of Registration, along with Massachusetts State Licensure, allowing Beckman Coulter Genomics to begin accepting clinical samples for genetic sequencing – the most technically complex CLIA category – and to provide those results to physicians for their use in treating, diagnosing and preventing disease in patients.

This milestone certification paves the way for detection of BRAF exon 11 (codons 439-477) and exon 15 (codons 581-620) for mutations using PCR-based DNA Sanger sequencing, the first clinical molecular diagnostic assay the company has developed. Plans call for Beckman Coulter Genomics to develop further CLIA-certified assays using next-generation sequencing for a number of oncology and infectious disease applications.

‘This certification allows Beckman Coulter to work more closely with physicians to bring the promise of high-quality molecular diagnostics to benefit greater numbers of patients,’ said Joseph Repp, vice president and general manager of Beckman Coulter Genomics. ‘We’re actively working to bring additional assays to physicians and clinical researchers across the country, as well as help all our customers further their understanding of genetic involvement in disease states.’

Beckman Coulter
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A single stem cell mutation triggers fibroid tumours

, 26 August 2020/in E-News /by 3wmedia

Fibroid uterine tumours affect an estimated 15 million women in the United States, causing irregular bleeding, anaemia, pain, and infertility. Despite the high prevalence of the tumours, which occur in 60 percent of women by age 45, the molecular cause has been unknown.
New Northwestern Medicine pre-clinical research has for the first time identified the molecular trigger of the tumour — a single stem cell that develops a mutation, starts to grow uncontrollably and activates other cells to join its frenzied expansion.
‘It loses its way and goes wild,’ said Serdar Bulun, MD, the chair of obstetrics and gynaecology at Northwestern University Feinberg School of Medicine and Northwestern Memorial Hospital. ‘No one knew how these came about before. The stem cells make up only 1.5 percent of the cells in the tumour, yet they are the essential drivers of its growth.’
The stem cell initiating the tumour carries a mutation called MED12. Recently, mutations in the MED12 gene have been reported in the majority of uterine fibroid tissues. Once the mutation kicks off the abnormal expansion, the tumours grow in response to steroid hormones, particularly progesterone.
For the study, researchers examined the behaviour of human fibroid stem cells when grafted into a mouse, a novel model initiated by Northwestern scientist Takeshi Kurita, PhD, a research associate professor of obstetrics and gynaecology. The most important characteristic of fibroid stem cells is their ability to generate tumours. Tumours originating from the fibroid stem cell population grew 10 times larger compared to tumours initiated with the main cell population, suggesting a key role of these tumour stem cells is to initiate and sustain tumour growth.
‘Understanding how this mutation directs the tumor growth gives us a new direction to develop therapies,’ said Bulun, also the George H. Gardner Professor of Clinical Gynecology. University Feinberg School of Medicine

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Experts identify inhibitor causing male pattern baldness and target for hair loss treatments

, 26 August 2020/in E-News /by 3wmedia

Researchers from the Perelman School of Medicine at the University of Pennsylvania have identified an abnormal amount a protein called Prostaglandin D2 in the bald scalp of men with male pattern baldness, a discovery that may lead directly to new treatments for the most common cause of hair loss in men. In both human and animal models, researchers found that a prostaglandin known as PGD2 and its derivative, 15-dPGJ2, inhibit hair growth. The PGD2-related inhibition occurred through a receptor called GPR44, which is a promising therapeutic target for androgenetic alopecia in both men and women with hair loss and thinning.
Male pattern baldness strikes 8 of 10 men under 70 years old, and causes hair follicles to shrink and produce microscopic hairs, which grow for a shorter duration of time than normal follicles.
Researchers took an unbiased approach when scanning for potential biological causes of baldness, looking in scalp tissue from balding and non-bald spots from men with male pattern baldness and then corroborating findings in mouse models. They found that levels of PGD2 were elevated in bald scalp tissue at levels 3 times greater than what was found in comparative haired scalp of men with androgenetic alopecia. When PGD2 was added to cultured hair follicles, PGD2-treated hair was significantly shortened, while PGD2’s derivative, 15-dPGJ2, completely inhibited hair growth.
‘Although a different prostaglandin was known to increase hair growth, our findings were unexpected, as prostaglandins haven’t been thought about in relation to hair loss, yet it made sense that there was an inhibitor of hair growth, based on our earlier work looking at hair follicle stem cells,’ said George Cotsarelis, MD, chair and professor of Dermatology, and senior author on the studies. In a Penn study published in the Journal of Clinical Investigation last year, underlying hair follicle stem cells were found intact, suggesting that the scalp was lacking an activator or something was inhibiting hair follicle growth.
Prostaglandins are well characterised for their role in many bodily functions — controlling cell growth, constricting and dilating smooth muscle tissue — and a different prostaglandin (F2alpha) is known to increase hair growth. Researchers found that as PGD2 inhibits hair growth, other prostaglandins work in opposition, enhancing and regulating the speed of hair growth.
While these studies looked at AGA in men, the researchers noted that prostaglandins may represent a common pathway shared by both men and women with AGA. Future studies, potentially testing topical treatments that may target GPR44, can determine whether targeting prostaglandins will benefit woman with AGA as well. Penn University

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Genetic mutations that cause common childhood brain tumours identified

, 26 August 2020/in E-News /by 3wmedia

Researchers at the Stanford University School of Medicine and Lucile Packard Children’s Hospital have identified several gene mutations responsible for the most common childhood brain tumour, called medulloblastoma, adding evidence to the theory that the diagnosis is a group of genetically distinct cancers with different prognoses. These and accompanying findings are likely to lead to less-toxic, better-targeted treatment approaches over the next two years, the researchers said.
‘We tend to treat all medulloblastomas as one disease without taking into account how heterogeneous the tumours are at the molecular level,’ said Yoon-Jae Cho, MD, an assistant professor of neurology and neurological sciences at Stanford, a pediatric neurologist at Packard Children’s and the senior author of the new research. ‘This paper represents a finer-grained view of the genetic landscape of these tumours and provides us with some leads on how to develop new therapies.’
The research is part of a large, ongoing effort to characterise genetic errors in medulloblastoma. Two companion studies on which Cho is a co-author will be published simultaneously with his paper. The three papers came from a consortium that involves scientists at Stanford, Packard Children’s, the Broad Institute, Children’s Hospital Boston, the Dana-Farber Cancer Institute, the German Cancer Research Center, Brandeis University and the Hospital for Sick Children in Toronto.
Current treatment for medulloblastoma, which originates in the cerebellum and affects about 250 U.S. children each year, begins with surgery to remove as much of the tumour as possible. Patients then receive a combination of radiation and chemotherapy, but the treatments are not tailored to the tumour’s genetic characteristics.
Cho’s team extracted DNA from 92 medulloblastoma tumours and compared it with DNA from matched blood samples from the same patients, uncovering 12 significant ‘point mutations’ — single-letter errors in the genetic code — that occurred frequently in the brain cancer. A handful of the mutations had been previously identified in smaller studies of medulloblastoma, but several mutations were novel in both medulloblastoma and in cancer.
Among the newly identified mutations was one in an RNA helicase gene, DDX3X, which Cho said is the second-most common mutation in medulloblastoma tumours. ‘Mutations in this gene have now also been identified in other tumour types, such as chronic lymphocytic leukaemia, and head and neck tumours,’ he said.
However, the researchers found that it was rare for the same gene mutated in several different patients’ tumours. More commonly, mutations involving a set of genes regulating a single biological pathway were found in the tumours — a pattern that is emerging across cancer genome sequencing efforts.
Though no single tumour in the study carried all 12 mutations, the researchers were able to categorise the tumours according to which mutations they possessed. ‘We now understand that there are certain tumours with particular genetic signatures that are really resistant to standard treatments,’ Cho said. Children with medulloblastoma do not routinely have their tumours’ genetic signatures characterised, but Cho believes that such characterisation coupled with targeted therapies could greatly enhance tumour treatment.
About two-thirds of medulloblastoma patients now survive five years past diagnosis, but many survivors suffer lasting physical or intellectual side effects from their cancer treatments. Drugs tailored to a tumour’s genetic profile have the potential to save more patients while reducing side effects, Cho said.
Several of the mutations discovered affect cellular signals that switch large groups of genes on and off. ‘The dysregulation of these ‘epigenetic programs’ is becoming a common theme not only in medulloblastoma but across cancer,’ Cho said. Such pathways may be good targets for cancer drugs; indeed, drugs targeting one such pathway (histone methyltransferases) are currently in pre-clinical development, while agents against another pathway (Hedgehog signaling pathway) are entering phase-2 clinical trials for medulloblastoma. EurekAlert

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Mayo Clinic IDs immune system glitch tied to fourfold higher likelihood of death

, 26 August 2020/in E-News /by 3wmedia

Mayo Clinic researchers have identified an immune system deficiency whose presence shows someone is up to four times likelier to die than a person without it. The glitch involves an antibody molecule called a free light chain; people whose immune systems produce too much of the molecule are far more likely to die of a life-threatening illness such as cancer, diabetes and cardiac and respiratory disease than those whose bodies make normal levels.
Researchers studied blood samples from nearly 16,000 people 50 and older enrolled in a population-based study of plasma cell disorders in Olmsted County, Minn. They found that those who had the highest level of free light chains — the top 10 percent — were about four times more at risk of dying than those with lower levels. Even after accounting for differences in age, gender and kidney function, the risk of death was roughly twice as high.
The study suggests that high levels of free light chains are markers of increased immune system response to infection, inflammation or some other serious disorders, says lead researcher Vincent Rajkumar, M.D., a Mayo Clinic hematologist.
Researchers have known that high levels of free light chains are associated with increased risk of death among patients with plasma disorders, such as lymphomas and other blood cancers, but this is the first study to find that high levels of light chains are associated with increased mortality in the general population. Free light chain levels can be measured by using a serum free light chain assay, a simple blood test. This test is often used to monitor light chain levels in patients with plasma disorders such as myeloma to gauge how well they are responding to treatment.
However, Dr. Rajkumar cautions against administering this test with the intent of gauging one’s risk of death.
‘We do not recommend this test as a screening test, because it will only cause alarm,’ Dr. Rajkumar says. ‘We do not know why this marker is associated with higher rates of death. We do not have a way of turning things around. Therefore, I would urge caution in using this test until we figure out what to do about it and what these results mean.’ Mayo Clinic Minnesota

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Medicines for malaria venture

, 26 August 2020/in E-News /by 3wmedia

One hundred million treatments of Coartem Dispersible (artemether-lumefantrine), an antimalarial developed especially for children with Plasmodium falciparum malaria, have been delivered by Novartis to 39 malaria-endemic countries, Medicines for Malaria Venture (MMV) has announced.
This antimalarial is the product of the partnership between MMV and Novartis. It is the first WHO prequalified child-friendly artemisinin-combination therapy (ACT) and addresses an unmet need for paediatric medicines. Young children in Africa are disproportionately affected by malaria, with 86% of malaria deaths occurring in children under the age of five years.
Ahead of the international community’s call for better child-friendly medicines, MMV and Novartis signed an agreement in 2003 to develop the first paediatric ACT. The child-friendly formulation was launched in 2009.
Focused measures have been taken to facilitate the uptake of this medicine, including registration in 39 malaria-endemic countries, a without-profit pricing model and special packaging designed to improve compliance. These measures have not only led to increased demand but also to an accelerated uptake, underlining the advantage of the paediatric formulation. By reaching this one hundred million treatments milestone, the Novartis Malaria Initiative and MMV have proven that drug development partnerships can truly advance the fight against malaria.

http://tinyurl.com/6t8bcw8
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