Novel breast cancer gene found

A new study identifies a gene that is especially active in aggressive subtypes of breast cancer. The research suggests that an overactive BCL11A gene drives triple-negative breast cancer development and progression.

The research, which was done in human cells and in mice, provides new routes to explore targeted treatments for this aggressive tumour type.

There are many types of breast cancers that respond differently to treatments and have different prognoses. Approximately one in five patients is affected by triple-negative breast cancer; these cancers lack three receptor proteins that respond to hormone therapies used for other subtypes of breast cancer. In recent years it has become apparent that the majority of triple-negative tumours are of the basal-like subtype.

Although new treatments are being explored, the prognosis for triple-negative cancer is poorer than for other types. To date, only a handful of genomic aberrations in genes have been associated with the development of triple-negative breast cancer.

The team looked at breast cancers from almost 3000 patients. Their search had a particular focus: they examined changes to genes that affect the behaviour of stem cells and developing tissues, because other work they have done suggests that such genes, when mutated, can often drive cancer development. Among these was BCL11A.

‘Our understanding of genes that drive stem cell development led us to search for consequences when these genes go wrong,’ says Dr Pentao Liu, senior author on the study, from the Wellcome Trust Sanger Institute. ‘BCL11A activity stood out because it is so active in triple-negative cancers.

‘It had all the hallmarks of a novel breast cancer gene.’

Higher activity of the BCL11A gene was found in approximately eight out of ten patients with basal-like breast cancer and was associated with a more advanced grade of tumour. In cases where additional copies of the BCL11A gene were created in the cancer, the prospects for survival of the patient were diminished.

‘Our gene studies in human cells clearly marked BCL11A as a novel driver for triple-negative breast cancers,’ says Dr Walid Khaled, joint first author on the study from the Wellcome Trust Sanger Institute and University of Cambridge. ‘We also showed that adding an active human BCL11A gene to human or mouse breast cells in the lab drove them to behave as cancer cells. Wellcome Trust Sanger Institute